These double chocolate filled cookies are rich, fudgy, and filled with chocolate chips and a smooth chocolate ganache center.
You can't go wrong with these — bring them to birthday parties, family events, and holiday gatherings, or enjoy them on a regular Tuesday just because. For a make-ahead chocolate dessert that feeds a crowd, try my chocolate sheet cake with chocolate cream cheese frosting.

Quick Look: Double Chocolate-Filled Cookies
⏱️ Ready In: about 45 minutes (plus ganache freeze time)
🔥 Bake Time: 13–15 minutes
🍽️ Serves: 30 cookies
✨ Calories: 201 per cookie
🥄 Main Ingredients: cocoa, chocolate chips, chocolate ganache, butter
🌿 Dietary: Vegetarian
💛 Why You'll Love It: rich, fudgy chocolate cookies with a molten ganache center
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Why You'll Love This Recipe
Triple the chocolate. Cocoa in the dough, mini chips folded in, and a ganache center — chocolate three ways in every bite. If you love chocolate desserts, make sure you try my raspberry chocolate tart!
A molten ganache surprise. The frozen ganache center bakes into a gooey, fudgy pocket of pure chocolate.
That sugar-rolled finish. A roll in sugar before baking gives the cookies a sweet, sparkly, slightly crisp exterior.
Easy to handle. The dough is thick and scoopable, which makes stuffing and shaping simple — no chilling the dough required.
Crowd-pleasing and giftable. Rich and impressive, perfect for cookie boxes, much like my chocolate-stuffed sourdough peanut butter cookies and brown butter sugar cookies.
Jump to:
- Quick Look: Double Chocolate-Filled Cookies
- Why You'll Love This Recipe
- Ingredients You'll Need
- Easy Substitutions & Variations
- How to Make Chocolate-Filled Cookies
- Expert Tips
- What Makes This Recipe Special?
- Chocolate-Filled Cookies FAQs
- Filled Cookie Troubleshooting Guide
- Storage
- Other Chocolate Recipes to Consider
- Double Chocolate Filled Cookies
Ingredients You'll Need

For the cookies:
- Unsalted butter — room temperature, creamed for a soft, fudgy base.
- Brown and cane sugar — brown for chew and depth, cane for structure.
- Egg and vanilla — for richness and flavor.
- All-purpose flour, cocoa powder, baking soda, and salt — the chocolatey base and lift.
- Espresso powder (optional) — deepens the chocolate flavor.
- Mini chocolate chips — folded into the dough for extra chocolate.
For the ganache:
- Semi-sweet chocolate chips and heavy cream — melted into a smooth ganache center.
For the sugar roll:
- Cane sugar — for that shimmery, sweet coating (plus optional cardamom).
See recipe card for quantities.
Easy Substitutions & Variations
Dairy-free butter: Use a non-dairy stick butter or a neutral oil like coconut oil.
Dairy-free ganache: Use a non-dairy heavy cream or a full-fat oat milk in place of the cream.
Festive: Roll the cookies in seasonal sprinkles instead of plain sugar.
Cardamom: Add ½ teaspoon cardamom to the rolling sugar for a subtle, warm flavor that enhances the chocolate.
White chocolate: Use white chocolate for a white chocolate ganache center. If you love white chocolate, then you need to try my matcha white chocolate cookies!
Caramel: Stuff with caramel instead of ganache (store-bought or homemade).
Sourdough: Use my sourdough chocolate peanut butter swirl cookie dough in place of the regular dough (leave the peanut butter in or out).
How to Make Chocolate-Filled Cookies

1. Make the ganache. Heat the heavy cream until it just begins to bubble, stirring constantly. Pour over the chocolate chips and stir until smooth. Cover and freeze until solid, about 30 minutes to 1 hour. Keep it frozen until you're ready to stuff the cookies.

2. Make the dough. Cream the butter, brown sugar, and cane sugar until light and fluffy. Mix in the vanilla and egg until just combined, then add the dry ingredients and mix. Stir in the mini chocolate chips. The dough will be thick and easy to handle.

3. Stuff the cookies. Preheat the oven to 350°F. Scoop a 2-tablespoon ball of dough, flatten it in your hand, place ½ teaspoon of frozen ganache in the center, fold the dough around it, and roll into a smooth ball.

4. Roll and bake. Roll each ball in the sugar (and cardamom, if using), place 2 inches apart on a lined sheet, and bake for 13–15 minutes (14 is my sweet spot). Keep the ganache in the freezer between batches. Cool on the pan 5 minutes before transferring.
Weigh your ingredients! Using a kitchen scale ensures your measurements are accurate, which is key for getting consistent results in baking. It takes the guesswork out of measuring and helps your recipes turn out exactly as intended every time.
Expert Tips
1. Freeze the ganache solid. It must be frozen firm to stuff easily and to stay gooey in the center after baking. Keep it in the freezer between batches.
2. Seal the dough fully. Wrap the dough all the way around the ganache so it doesn't leak out while baking.
3. Watch for the shine. The cookies are done when the tops are no longer shiny — don't overbake them.
4. Let them set on the pan. Cool 5 minutes on the baking sheet so the bottoms firm up and support the gooey center before you move them.
5. Weigh your ingredients. A scale gives you the most consistent, fudgy texture batch after batch.
What Makes This Recipe Special?
These cookies are a chocolate lover's dream because they deliver chocolate in three distinct ways: a deeply cocoa-rich dough, mini chocolate chips melted throughout, and a frozen-then-baked ganache center that turns molten in the oven. That ganache trick is the showstopper — freezing it solid means it survives shaping but melts into a gooey pocket as the cookies bake.
The sugar roll adds a sweet, sparkly, slightly crisp shell that contrasts beautifully with the fudgy interior. It's an impressive, bakery-style cookie that's surprisingly simple to pull off — the same wow-factor as my sourdough chocolate crinkle cookies, with a molten center to boot.
Chocolate-Filled Cookies FAQs
Yes! See my "substitutions" section for my favorite dairy-free baking ingredients.
Yes — use my sourdough chocolate peanut butter swirl cookie dough as the base.
The dough wasn't sealed fully, or the ganache thawed. Keep it frozen and wrap the dough completely around it.
Filled Cookie Troubleshooting Guide
| Problem | Cause | Fix |
|---|---|---|
| Ganache leaked out | Dough not sealed, or ganache thawed | Freeze ganache solid; seal dough fully |
| Cookies overbaked/dry | Left in too long | Pull when tops are no longer shiny |
| Cookies fell apart | Moved too soon | Cool 5 min on the pan before transferring |
| Dough too soft to shape | Butter too warm | Chill the dough briefly |
| Centers not gooey | Ganache not frozen enough | Freeze ganache until fully solid |
Storage
Room temperature: Store in an airtight container for up to 7 days.
Freezer: Freeze for up to 6 months. Thaw in the fridge to prevent condensation from making them soggy.
Other Chocolate Recipes to Consider
Did you make this recipe?
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Double Chocolate Filled Cookies
Equipment
- Stand Mixer
- small bowl for ganache
- Baking sheet
- Parchment Paper
- Cooling rack
Ingredients
For the double chocolate cookies:
- 300 g all-purpose flour 2½ cups
- 50 g cocoa powder ½ cup
- 1 teaspoon salt
- 1 teaspoon baking soda
- 227 g unsalted butter room temperature (1 cup)
- 213 g brown sugar 1 cup
- 100 g granulated sugar ½ cup
- 1 egg
- 1 teaspoon vanilla extract
- 1½ teaspoon espresso powder optional
- 1 –1½ cups mini chocolate chips 170–255g
For the ganache:
- 100 g semi-sweet chocolate chips ⅔ cup
- 60 g heavy cream ¼ cup
For the sugar roll:
- ⅓ cup granulated sugar ~67g
- ½ teaspoon cardamom optional
Instructions
- Ganache: Heat the heavy cream until it just begins to bubble, stirring constantly. Pour over the chocolate chips and stir until smooth. Cover and freeze until solid, about 30 minutes. Keep frozen until ready to use.60 g heavy cream, 100 g semi-sweet chocolate chips
- Cream the butter, brown sugar, and granulated sugar until light and fluffy.227 g unsalted butter, 213 g brown sugar, 100 g granulated sugar
- In a separate bowl, mix the dry ingredients.300 g all-purpose flour, 50 g cocoa powder, 1 tsp salt, 1 tsp baking soda, 1½ tsp espresso powder
- Mix in the vanilla and egg until just combined. Add the dry ingredients and mix, then stir in the mini chocolate chips. The dough will be thick.1 egg, 1 tsp vanilla extract, 1 –1½ cups mini chocolate chips
- Preheat the oven to 350°F. Scoop a 2-tablespoon ball of dough, flatten it, place ½ teaspoon frozen ganache in the center, fold the dough around it, and roll into a smooth ball.
- Roll each ball in the sugar (and cardamom, if using) and place 2 inches apart on a lined sheet.⅓ cup granulated sugar, ½ tsp cardamom
- Bake 13–15 minutes (14 is the sweet spot), keeping the ganache frozen between batches. Cool on the pan 5 minutes before transferring.
Notes
- The cookies are done when the tops are no longer shiny — don't overbake.
- Let them cool on the pan a few minutes so the bottoms set and support the gooey ganache center.
- Use 1–1½ cups mini chocolate chips in the dough (a 12-oz bag is ~1½ cups).
- Store at room temperature for up to 7 days, or freeze for up to 6 months (thaw in the fridge).









Allen Powell says
My favorite!
Kim says
I noticed you refer to using mini chocolate chips in the dough, and also include adding chocolate chips in the instructions, but I don't see chocolate chips listed as an ingredient except in the ganache. What is the measure of chocolate chips to add to the dough? Thank you!
Audrey says
Hi Kim! Sorry for the confusion, I usually measure chocolate chips with my heart and I forgot to make note of that in the recipe! I would use 1-1.5 cups of mini chocolate chips for this recipe. A 12 ounce bag of chocolate chips would be 1.5 cups for reference. I hope you try and love the cookies!